Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3943118	3943151	34	23 [0]	[0] 4	bcsE	conserved hypothetical protein

CGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAATGCTG  >  W3110S.gb/3943053‑3943117                                                                 | cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:191723/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:913625/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:758264/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:715246/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:708847/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:555187/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:451285/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:2422105/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:2404107/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:2262765/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:2259318/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:2152747/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:1066886/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:1902160/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:1829776/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:169245/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:1683896/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:1617635/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:1428798/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:1280850/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:1259161/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:1153752/1‑65 (MQ=255) cGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAAtgctg  >  1:1093642/1‑65 (MQ=255)                                                                 | CGGTATTTTCCCGCACGAGGATTTTCATCGCACTACCGCGCTGGCGACGCAGGGTATGAATGCTG  >  W3110S.gb/3943053‑3943117

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑