Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3966263	3966282	20	29 [0]	[0] 12	yhjD	conserved inner membrane protein

AACGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTC  >  W3110S.gb/3966196‑3966262                                                                   | aaCGATGGCAGGGTGTAGGTCATCACGA‑‑TTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:861075/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:2074128/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:81056/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:799473/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:784995/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:749043/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:736218/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:354849/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:263743/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:2482579/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:2316596/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:2263244/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:2216472/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:1010485/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:206693/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:1735650/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:1706249/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:1651933/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:1524216/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:1495285/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:1179473/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:1156252/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:1128521/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:1124759/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:1074066/65‑1 (MQ=255)   cGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:1039766/65‑1 (MQ=255)    gATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATTTTc  <  1:1912778/64‑1 (MQ=255)    gATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:574665/64‑1 (MQ=255)                      atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTc  <  1:2212950/46‑1 (MQ=255)                                                                   | AACGATGGCAGGGTGTAGGTCATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTC  >  W3110S.gb/3966196‑3966262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑