Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4040005	4040085	81	33 [0]	[0] 6	rpoH	RNA polymerase, sigma 32 (sigma H) factor

CCTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGT  >  W3110S.gb/4039941‑4040004                                                                | ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:245720/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:2013564/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:2042818/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:2077749/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:2145367/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:2147352/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:2271139/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:2324420/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:2353078/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:1933589/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:353684/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:53026/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:783215/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:833081/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:846096/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:970905/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:99961/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:1192002/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:1813750/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:1799956/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:1732747/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:1718787/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:1675250/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:1648062/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:1647289/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:1561660/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:1553063/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:1520809/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:1498148/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:1437876/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:128481/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:1231597/1‑64 (MQ=255) ccTTCGCCGTTCACTGGATCAAAGCAGAGATCCAAGAATACGTTCTGCGTAACTGGCGTATCGt  >  1:1675671/1‑64 (MQ=255)                                                                | CCTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGT  >  W3110S.gb/4039941‑4040004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑