Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4179660	4179667	8	28 [0]	[0] 8	gspF	general secretory pathway component, cryptic

CGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATG  >  W3110S.gb/4179596‑4179659                                                                | cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:1901402/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:934963/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:913333/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:863998/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:594918/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:479870/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:443867/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:34920/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:2377577/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:2303667/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:2172867/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:2069676/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:1006243/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:1900789/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:1682469/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:1676600/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:156813/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:1349316/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:1340774/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:1315195/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:1315028/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:1179270/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:1137368/64‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:113279/64‑1 (MQ=255)  gCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:1507084/63‑1 (MQ=255)  gCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:27459/63‑1 (MQ=255)                     agCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:1447779/44‑1 (MQ=255)                           atcGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATg  <  1:256104/38‑1 (MQ=255)                                                                | CGCCAGAGGCCACCATGTAGAGCATCATCGGCGGGAAAATTGCGGTTTGTTCCAGCGAAAGATG  >  W3110S.gb/4179596‑4179659

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑