Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4280920	4280929	10	30 [0]	[0] 41	soxS	DNA‑binding transcriptional dual regulator

TTCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTGG  >  W3110S.gb/4280855‑4280919                                                                 | ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCATTGTTAAGCGGCTgg  <  1:907679/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:1331727/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:864987/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:788740/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:766689/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:663502/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:496355/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:393795/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:336908/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:257265/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:2500326/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:2290037/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:226497/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:219386/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:2184703/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:2144039/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:2082948/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:175826/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:1633799/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:1610065/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:1582319/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:1531774/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:1446137/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:1439697/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:1389947/65‑1 (MQ=255) ttCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:1157875/65‑1 (MQ=255) ttCGTCGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:958810/65‑1 (MQ=255)  tCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTgg  <  1:2283775/64‑1 (MQ=255)          aGTACCACTTTGAATAGCCTGATTTTTTTGAGACTACATCAATGTTAAGCGGCTgg  <  1:1974688/56‑1 (MQ=255)                             tGATTTTTTTGCGACTACATCAATGTTAAGCGTCTgg  <  1:1428298/37‑1 (MQ=255)                                                                 | TTCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTTTGCGACTACATCAATGTTAAGCGGCTGG  >  W3110S.gb/4280855‑4280919

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑