Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4317304	4317314	11	15 [0]	[2] 14	rpiR	DNA‑binding transcriptional repressor

CCCGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACGGTGGATCTCATCAACGTTGACGATCGAC  >  W3110S.gb/4317239‑4317303                                                                 | cccGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACTGTGGATCTCATCAACGTTGACGATCGAc  <  1:1947284/65‑1 (MQ=255) cccGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACGGTGGATCTCATCAACGTTGACGATCGAc  <  1:2105249/65‑1 (MQ=255) cccGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACGGTGGATCTCATCAACGTTGACGATCGAc  <  1:2179602/65‑1 (MQ=255) cccGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACGGTGGATCTCATCAACGTTGACGATCGAc  <  1:2298578/65‑1 (MQ=255) cccGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACGGTGGATCTCATCAACGTTGACGATCGAc  <  1:234102/65‑1 (MQ=255) cccGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACGGTGGATCTCATCAACGTTGACGATCGAc  <  1:2419462/65‑1 (MQ=255) cccGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACGGTGGATCTCATCAACGTTGACGATCGAc  <  1:247632/65‑1 (MQ=255) cccGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACGGTGGATCTCATCAACGTTGACGATCGAc  <  1:2509768/65‑1 (MQ=255) cccGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACGGTGGATCTCATCAACGTTGACGATCGAc  <  1:2531319/65‑1 (MQ=255) cccGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACGGTGGATCTCATCAACGTTGACGATCGAc  <  1:285517/65‑1 (MQ=255) cccGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACGGTGGATCTCATCAACGTTGACGATCGAc  <  1:450302/65‑1 (MQ=255) cccGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACGGTGGATCTCATCAACGTTGACGATCGAc  <  1:600977/65‑1 (MQ=255) cccGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACGGTGGATCTCATCAACGTTGACGATCGAc  <  1:669835/65‑1 (MQ=255) cccGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACGGTGGATCTCATCAACGTTGACGATCGAc  <  1:753712/65‑1 (MQ=255) cccGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACGGTGGATCTCATCAACGTTGACGATCGAc  <  1:765437/65‑1 (MQ=255)                                                                 | CCCGCTGTCTGGCCTGATAGAAAAAGCGGGCGGCACGGTGGATCTCATCAACGTTGACGATCGAC  >  W3110S.gb/4317239‑4317303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑