Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	417756	417843	88	19 [0]	[0] 18	phoR	sensory histidine kinase in two‑component regulatory system with PhoB

ACGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGT  >  W3110S.gb/417695‑417755                                                             | aCGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:1211649/61‑1 (MQ=255) aCGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:604010/61‑1 (MQ=255) aCGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:480610/61‑1 (MQ=255) aCGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:45712/61‑1 (MQ=255) aCGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:2221531/61‑1 (MQ=255) aCGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:2151630/61‑1 (MQ=255) aCGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:2092539/61‑1 (MQ=255) aCGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:1703599/61‑1 (MQ=255) aCGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:1368538/61‑1 (MQ=255) aCGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:1323199/61‑1 (MQ=255) aCGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:1289087/61‑1 (MQ=255) aCGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:1112883/61‑1 (MQ=255) aCGCAAATGCAT‑AACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:873813/60‑1 (MQ=255)  cGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:1802180/60‑1 (MQ=255)  cGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:2199888/60‑1 (MQ=255)  cGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:511318/60‑1 (MQ=255)               aCTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:2405674/47‑1 (MQ=255)                   gAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:2190473/43‑1 (MQ=255)                          cgcgGCGTAACTTTTTTGCCAACGTGAGCCATGAGt  <  1:1673291/36‑1 (MQ=255)                                                             | ACGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGT  >  W3110S.gb/417695‑417755

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑