Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	660465	660501	37	31 [3]	[0] 7	lipA	lipoate synthase

AAGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCATTGCGG  >  W3110S.gb/660400‑660469                                                                 |      aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:2253441/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:866745/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:683306/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:543304/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:428940/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:373259/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:310196/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:2538949/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:2534619/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:2532272/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:2521934/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:2513857/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:2448206/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:2351884/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:1172772/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:2103879/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:1928419/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:1891408/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:1886998/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:1837268/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:1680870/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:1605038/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:1548707/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:1422335/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:1203102/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:1190275/1‑65 (MQ=255) aaGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGAAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:535480/1‑65 (MQ=255) aaGCATTCCGCCAGGTAAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCAt       >  1:2415225/1‑65 (MQ=255)      ttCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCATTGCgg  <  1:2211104/65‑1 (MQ=255)      ttCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCATTGCgg  <  1:1837750/65‑1 (MQ=255)      ttCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCATTGCgg  <  1:1638710/65‑1 (MQ=255)                                                                 |      AAGCATTCCGCCAGGTTAGGGCAGGAGGCTTCCTCGCAGACAGAATGCAGGCCATTTTTGCGCATTGCGG  >  W3110S.gb/660400‑660469

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑