Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	998980	998998	19	22 [0]	[0] 20	ycbR	predicted periplasmic pilin chaperone

AAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATC  >  W3110S.gb/998915‑998979                                                                 | aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:2504463/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:962617/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:939399/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:85149/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:776966/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:715924/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:690530/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:610330/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:595037/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:559804/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:47928/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:1242498/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:2466576/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:2036741/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:2027205/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:1948822/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:1861646/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:1848918/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:1820814/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:1746163/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:1707942/1‑65 (MQ=255) aaaaCTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc  >  1:1388699/1‑65 (MQ=255)                                                                 | AAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATC  >  W3110S.gb/998915‑998979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑