Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	999778	999780	3	47 [0]	[0] 32	ycbS	predicted outer membrane usher protein

TCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAGATGA  >  W3110S.gb/999719‑999777                                                           | tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1060378/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:579133/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:501603/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:351800/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:2477033/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:2426681/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:2408653/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:62488/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:710686/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:2380470/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:739135/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:779802/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1922307/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1760107/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1590092/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1082396/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1123091/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1124172/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:935609/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1159477/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:905736/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1469908/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:861817/1‑59 (MQ=255) tCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1564570/1‑59 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:879917/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:76368/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:852723/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:599449/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:588681/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:806582/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:836362/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:2401296/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:2534481/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:2431/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1049294/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:2382579/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:2206139/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:2006384/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:19471/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1878035/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:16546/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1538201/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1515071/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1309037/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1276743/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAgatga  >  1:1157371/1‑44 (MQ=255)                gCACAAGCTGAAACCTGGATCGATCCTGCTTTTTTCAAAcatga  >  1:978412/1‑44 (MQ=38)                                                           | TCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAGATGA  >  W3110S.gb/999719‑999777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑