Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1138474	1138475	2	7 [0]	[0] 35	flgI	predicted flagellar basal body protein

TTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCG  >  W3110S.gb/1138409‑1138473                                                                 | ttGCAACTTTACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCgcgtgcg  <  1:1763572/65‑1 (MQ=255) ttGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACTCCATCAACCgcgtgcg  <  1:31910/65‑1 (MQ=255) ttGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCgcgtgcg  <  1:155275/65‑1 (MQ=255) ttGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCgcgtgcg  <  1:2065375/65‑1 (MQ=255) ttGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCgcgtgcg  <  1:791758/65‑1 (MQ=255) ttGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCgcgtgcg  <  1:796922/65‑1 (MQ=255)  tGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCgcgtgcg  <  1:845796/64‑1 (MQ=255)                                                                 | TTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCG  >  W3110S.gb/1138409‑1138473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑