Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1139361	1139365	5	5 [0]	[0] 28	flgJ	muramidase

CGCTCGAAACTGTGGTGCGTTATCAAAATCAGGCGCTTTCGCAGCTGGTGCAAAAGGCCGTGCC  >  W3110S.gb/1139297‑1139360                                                                | cGCTCGAAACTGTGGTGCGTTATCAAAATCAGGCGCTTTCGCCGCTGGTGCAAAAGGCCGTGcc  <  1:2236035/64‑1 (MQ=255) cGCTCGAAACTGTGGTGCGTTATCAAAATCAGGCGCTTTCGCAGCTGGTGCAAAAGGCCGTGcc  <  1:1462998/64‑1 (MQ=255) cGCTCGAAACTGTGGTGCGTTATCAAAATCAGGCGCTTTCGCAGCTGGTGCAAAAGGCCGTGcc  <  1:1765792/64‑1 (MQ=255) cGCTCGAAACTGTGGTGCGTTATCAAAATCAGGCGCTTTCGCAGCTGGTGCAAAAGGCCGTGcc  <  1:186891/64‑1 (MQ=255) cGCTCGAAACTGTGGTGCGTTATCAAAATCAGGCGCTTCCGCAGCTGGTGCAAAAGGCCGTGcc  <  1:1709837/64‑1 (MQ=255)                                                                | CGCTCGAAACTGTGGTGCGTTATCAAAATCAGGCGCTTTCGCAGCTGGTGCAAAAGGCCGTGCC  >  W3110S.gb/1139297‑1139360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑