Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1190408	1190601	194	6 [0]	[0] 25	phoQ	sensory histidine kinase in two‑compoent regulatory system with PhoP

AATGTCCCGCCGCGCATACTGGCACGATGCAGGTAGTAGCCAATTTGCT  >  W3110S.gb/1190359‑1190407                                                 | aaTGTCCCGCCGCGCATACTGGCACGATGCAGGTAGTAGCCAATTTGCt  <  1:1161311/49‑1 (MQ=255) aaTGTCCCGCCGCGCATACTGGCACGATGCAGGTAGTAGCCAATTTGCt  <  1:1351046/49‑1 (MQ=255) aaTGTCCCGCCGCGCATACTGGCACGATGCAGGTAGTAGCCAATTTGCt  <  1:152429/49‑1 (MQ=255) aaTGTCCCGCCGCGCATACTGGCACGATGCAGGTAGTAGCCAATTTGCt  <  1:1531397/49‑1 (MQ=255) aaTGTCCCGCCGCGCATACTGGCACGATGCAGGTAGTAGCCAATTTGCt  <  1:2327364/49‑1 (MQ=255) aaTGTCCCGCCGCGCATACTGGCACGATGCAGGTAGTAGCCAATTTGCt  <  1:982704/49‑1 (MQ=255)                                                 | AATGTCCCGCCGCGCATACTGGCACGATGCAGGTAGTAGCCAATTTGCT  >  W3110S.gb/1190359‑1190407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑