Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1244865	1244949	85	24 [0]	[2] 23	emtA	lytic murein endotransglycosylase E

GTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCG  >  W3110S.gb/1244800‑1244864                                                                 | gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:2078387/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:901946/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:744875/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:592222/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:244241/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:2436325/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:2403329/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:2313164/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:2273735/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:2230586/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:10603/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:1998521/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:1842383/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:178053/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:1716795/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:171235/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:1670157/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:14562/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:1313745/65‑1 (MQ=255) gttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:1089115/65‑1 (MQ=255)  ttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:1918516/64‑1 (MQ=255)  ttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:1816673/64‑1 (MQ=255)  ttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:2469986/64‑1 (MQ=255)  ttgttCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCg  <  1:737152/64‑1 (MQ=255)                                                                 | GTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCG  >  W3110S.gb/1244800‑1244864

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑