Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1291651	1291683	33	23 [0]	[3] 25	rssA	conserved hypothetical protein

CCCGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACG  >  W3110S.gb/1291587‑1291650                                                                | cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:2400380/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:891816/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:863842/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:827193/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:714401/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:644427/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:562413/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:484127/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:304632/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:2527944/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:2400468/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:107100/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:2319707/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:220473/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:2113929/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:2028916/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:1981214/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:1960884/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:172043/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:1608062/64‑1 (MQ=255) cccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:1566244/64‑1 (MQ=255)  ccGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:422962/63‑1 (MQ=255)   cGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACg  <  1:2313248/62‑1 (MQ=255)                                                                | CCCGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACG  >  W3110S.gb/1291587‑1291650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑