Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1413709	1413735	27	19 [0]	[0] 20	[intR]	[intR]

GATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTT  >  W3110S.gb/1413650‑1413708                                                           | gATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:2329459/59‑1 (MQ=255) gATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:89288/59‑1 (MQ=255) gATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:850757/59‑1 (MQ=255) gATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:8373/59‑1 (MQ=255) gATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:836064/59‑1 (MQ=255) gATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:537550/59‑1 (MQ=255) gATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:520826/59‑1 (MQ=255) gATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:494059/59‑1 (MQ=255) gATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:256205/59‑1 (MQ=255) gATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:2528504/59‑1 (MQ=255) gATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:1004694/59‑1 (MQ=255) gATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:2098140/59‑1 (MQ=255) gATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:2070275/59‑1 (MQ=255) gATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:1955345/59‑1 (MQ=255) gATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:1868315/59‑1 (MQ=255) gATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:1195123/59‑1 (MQ=255)  aTTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:1568701/58‑1 (MQ=255)  aTTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:1345619/58‑1 (MQ=255)    tttCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACtt  <  1:1114426/56‑1 (MQ=255)                                                           | GATTTTCTTGCATTATTTCAGTTCTCTGGTACTAAATGGGGCAAATTGGGGGCAAACTT  >  W3110S.gb/1413650‑1413708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑