Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1420637	1420644	8	30 [0]	[0] 21	sieB	phage superinfection exclusion protein

CGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAA  >  W3110S.gb/1420573‑1420636                                                                | cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:2102287/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:982096/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:961808/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:876005/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:817038/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:733184/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:719128/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:66691/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:497494/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:422556/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:363668/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:237788/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:2256794/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:2205976/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:1001862/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:2063219/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:2048187/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:1850090/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:1824444/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:1692493/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:166400/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:1613132/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:1583867/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:140929/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:1375154/64‑1 (MQ=255) cGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:1186051/64‑1 (MQ=255)  gCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:1629386/63‑1 (MQ=255)  gCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCAATATTCATTACTACCAGAGCaa  <  1:2232973/63‑1 (MQ=255)   ccATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:2050833/62‑1 (MQ=255)                            acaTATTCAAAAGCATTATTCATTACTACCAGAGCaa  <  1:196209/37‑1 (MQ=255)                                                                | CGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAA  >  W3110S.gb/1420573‑1420636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑