Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1721952	1721955	4	29 [0]	[0] 15	slyB	outer membrane lipoprotein

CAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATGG  >  W3110S.gb/1721887‑1721951                                                                 | cAGGGCGTACAGAGTGGAATGAACAAAACGCAGGGTGTCGAGGTGGAAATTCGTAAAGACGATgg  <  1:1769533/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:188070/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:967160/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:840740/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:730321/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:649910/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:350052/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:271146/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:2375462/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:2323068/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:229345/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:200329/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:1905871/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:1815915/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:1741684/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:1641052/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:1558870/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:1466811/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:1460472/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:1378991/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:1370655/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:13026/65‑1 (MQ=255) cAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGATGGAAATTCGTAAAGACGATgg  <  1:1448774/65‑1 (MQ=255) cAGGGCGTACAGAGAGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:1546240/65‑1 (MQ=255)  aGGGCGTACAGAGTGCAATGATCAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:1336563/64‑1 (MQ=255)  aGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:1226993/64‑1 (MQ=255)  aGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:2045304/64‑1 (MQ=255)  aGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:836636/64‑1 (MQ=255)  aGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATgg  <  1:927239/64‑1 (MQ=255)                                                                 | CAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATGG  >  W3110S.gb/1721887‑1721951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑