Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1905235	1905241	7	49 [0]	[0] 19	manY	mannose‑specific enzyme IIC component of PTS

TAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTGC  >  W3110S.gb/1905170‑1905234                                                                 | tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:397474/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:2141105/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:2157726/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:2159708/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:2243860/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:2289392/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:2459911/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:2543290/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:266732/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:283738/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:305466/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:345187/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:350944/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1938858/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:468195/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:509181/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:511748/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:579817/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:625191/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:808830/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:878112/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:930223/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:943921/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:98439/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:987270/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1516953/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1136654/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1174674/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1223328/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:122551/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1279389/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1317278/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1354905/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1484583/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:149565/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1064706/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1533548/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1565192/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1664850/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1728500/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1729172/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1731291/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1778425/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1833020/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1865515/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1925078/65‑1 (MQ=255) tAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGACCCACGTTTCTTCTCTGTTCCTgc  <  1:1877194/65‑1 (MQ=255)  aaGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1210511/64‑1 (MQ=255)             tAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTgc  <  1:1206142/53‑1 (MQ=255)                                                                 | TAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTGC  >  W3110S.gb/1905170‑1905234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑