Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2074958	2075051	94	18 [2]	[0] 44	flu	antigen 43 (Ag43) phase‑variable biofilm formation autotransporter

TATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCGGTGATACGGCCACG  >  W3110S.gb/2074893‑2074971                                                                 |               tATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCg                <  1:1683211/65‑1 (MQ=255) tATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCg                <  1:885053/65‑1 (MQ=255) tATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCg                <  1:787164/65‑1 (MQ=255) tATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCg                <  1:536993/65‑1 (MQ=255) tATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCg                <  1:356552/65‑1 (MQ=255) tATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCg                <  1:1892862/65‑1 (MQ=255) tATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCg                <  1:184294/65‑1 (MQ=255) tATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCg                <  1:1218203/65‑1 (MQ=255) tATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCg                <  1:1604013/65‑1 (MQ=255) tATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCg                <  1:1330468/65‑1 (MQ=255) tATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCg                <  1:1317895/65‑1 (MQ=255) tATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCg                <  1:1284316/65‑1 (MQ=255) tATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCg                <  1:1275623/65‑1 (MQ=255) tATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCg                <  1:1250377/65‑1 (MQ=255)  aTCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCg                <  1:1333448/64‑1 (MQ=255)  aTCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCg                <  1:1766379/64‑1 (MQ=255)                            gATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCGGTGATACGGCCACg  >  1:1264628/1‑52 (MQ=255)                            gATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCGGTGATACGGCCACg  >  1:799537/1‑52 (MQ=255)                                                                 |               TATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCGGTGATACGGCCACG  >  W3110S.gb/2074893‑2074971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑