Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2099575	2099649	75	14 [0]	[0] 19	cld	regulator of length of O‑antigen component of lipopolysaccharide chains

CCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACG  >  W3110S.gb/2099523‑2099574                                                    | ccAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCacgacg  >  1:1257117/1‑52 (MQ=255) ccAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCacgacg  >  1:1728211/1‑52 (MQ=255) ccAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCacgacg  >  1:1897243/1‑52 (MQ=255) ccAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCacgacg  >  1:193793/1‑52 (MQ=255) ccAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCacgacg  >  1:1950595/1‑52 (MQ=255) ccAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCacgacg  >  1:2193638/1‑52 (MQ=255) ccAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCacgacg  >  1:2320835/1‑52 (MQ=255) ccAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCacgacg  >  1:2340798/1‑52 (MQ=255) ccAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCacgacg  >  1:278075/1‑52 (MQ=255) ccAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCacgacg  >  1:403637/1‑52 (MQ=255) ccAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCacgacg  >  1:439840/1‑52 (MQ=255) ccAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCacgacg  >  1:639949/1‑52 (MQ=255) ccAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCacgacg  >  1:713217/1‑52 (MQ=255) ccAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCacgacg  >  1:882929/1‑52 (MQ=255)                                                    | CCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACG  >  W3110S.gb/2099523‑2099574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑