Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2100055	2100064	10	8 [0]	[0] 13	cld	regulator of length of O‑antigen component of lipopolysaccharide chains

GGGCCAACTTCATTTGTGCGCCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTG  >  W3110S.gb/2099991‑2100054                                                                | gggCCAACTTCATTTGTGCGCCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTg  <  1:1024932/64‑1 (MQ=255) gggCCAACTTCATTTGTGCGCCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTg  <  1:106462/64‑1 (MQ=255) gggCCAACTTCATTTGTGCGCCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTg  <  1:1249207/64‑1 (MQ=255) gggCCAACTTCATTTGTGCGCCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTg  <  1:2495468/64‑1 (MQ=255) gggCCAACTTCATTTGTGCGCCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTg  <  1:346270/64‑1 (MQ=255) gggCCAACTTCATTTGTGCGCCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTg  <  1:443590/64‑1 (MQ=255) gggCCAACTTCATTTGTGCGCCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTg  <  1:508441/64‑1 (MQ=255)                          tGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTg  <  1:630294/39‑1 (MQ=255)                                                                | GGGCCAACTTCATTTGTGCGCCCTCTGCAGTTTGCCCAACATAAGAAACAGTCAATGGTAATTG  >  W3110S.gb/2099991‑2100054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑