Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 2166107 2166146 40 28 [0] [2] 33 baeS sensory histidine kinase in two‑component regulatory system with BaeR

TGACAGCGGCGGCAGCCTGCAAATCTCTGCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACG  >  W3110S.gb/2166119‑2166210
                            |                                                               
tGACAGCGGCGGCAGCCTGCAAATCTCTGCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTg                             <  1:2284397/65‑1 (MQ=255)
tGACAGCGGCGGCAGCCTGCAAATCTCTGCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTg                             <  1:580169/65‑1 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTTCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:287039/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGCCCTTTGCCGACAGTGCGCCAGGTGTCAGTGa    >  1:545405/1‑62 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:690913/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:2536281/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:2542952/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:493902/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:548522/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:2436133/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:704683/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:720925/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:842336/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:857349/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:878396/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:879296/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:937090/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:2499694/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:1009904/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:2399840/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:2253213/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:2223840/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:2208734/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:2181203/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:2121755/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:2116422/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:2038855/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:179697/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:1657898/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:1471712/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:1430663/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:120849/1‑64 (MQ=255)
                            gCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACg  >  1:1129403/1‑64 (MQ=255)
                            |                                                               
TGACAGCGGCGGCAGCCTGCAAATCTCTGCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACG  >  W3110S.gb/2166119‑2166210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: