Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2263309	2263438	130	16 [0]	[0] 32	fruA	fused fructose‑specific PTS enzyme IIB'BC components

CCGCCATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAC  >  W3110S.gb/2263439‑2263503 |                                                                 ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCg     >  1:823746/1‑62 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTa   >  1:2383427/1‑64 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTa   >  1:1520789/1‑64 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:703624/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:2386376/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:2410985/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:260621/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:298694/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:361330/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:44749/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:498876/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:2345223/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:713753/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:868855/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:904214/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:973555/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:987098/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:1062318/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:228615/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:2127028/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:2071161/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:2027912/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:1927514/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:1919167/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:1902614/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:1797798/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:1767068/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:1577950/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:1251447/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:1217534/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAc  >  1:106991/1‑65 (MQ=255) ccgccATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGAGTAc  >  1:2238771/1‑65 (MQ=255) |                                                                 CCGCCATAATCGCCGCCATCGGGCCATAGGTTTGAGTACTCAGCAGACCCACACCGAATGCGTAC  >  W3110S.gb/2263439‑2263503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑