Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2332652	2332753	102	9 [0]	[0] 47	yfaP	conserved hypothetical protein

TTCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATA  >  W3110S.gb/2332754‑2332814 |                                                             ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAGCAACGGAAGAAAAATCTTTCGCATa  <  1:1198020/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACTGAATAAAAATCTTTCGCATa  <  1:883427/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACTGAAGAAAAATCTTTCGCATa  <  1:2404500/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTGGCATa  <  1:299644/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:2086943/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:195452/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:2149359/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:2211495/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:2219730/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:2222993/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:2365821/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:2413437/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:2448472/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:2543602/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:26592/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:363636/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:384043/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:462988/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:527932/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:696081/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:697929/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:858914/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:864674/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:917329/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1500223/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:116576/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1183672/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1187028/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1247135/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1249710/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1269707/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1288139/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1322410/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1408711/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:142540/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:142609/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:2074566/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1524170/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1534452/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1606102/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1609891/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:173991/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1775067/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1775587/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1890710/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:19401/61‑1 (MQ=255) ttCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATa  <  1:1021650/61‑1 (MQ=255) |                                                             TTCACTGTGAGCGACAGGCGAAAGCGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATA  >  W3110S.gb/2332754‑2332814

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑