Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2478819	2478959	141	15 [0]	[0] 22	yfdO/yfdP	predicted defective phage replication protein O/hypothetical protein

TGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCAT  >  W3110S.gb/2478960‑2479024 |                                                                 tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAAc             >  1:1757755/1‑54 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCg        >  1:456700/1‑59 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCa   >  1:761469/1‑64 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCa   >  1:757862/1‑64 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCa   >  1:1439818/1‑64 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCa   >  1:1654430/1‑64 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCa   >  1:682939/1‑64 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCAt  >  1:2491451/1‑65 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCAt  >  1:756330/1‑65 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCAt  >  1:724511/1‑65 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCAt  >  1:555922/1‑65 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCAt  >  1:432744/1‑65 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCAt  >  1:432041/1‑65 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCAt  >  1:261453/1‑65 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCAt  >  1:2439074/1‑65 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCAt  >  1:2047910/1‑65 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCAt  >  1:2016450/1‑65 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCAt  >  1:1701921/1‑65 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCAt  >  1:1398943/1‑65 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCAt  >  1:1340060/1‑65 (MQ=255) tGACAGTTGAGAAAATGCCGCTGCCTGAAGATTCGCAACGTTAAGCTGATAAACATTCGACGCAt  >  1:1256044/1‑65 (MQ=255) tGACAGTTCAGAAAATGCCGCTGCCTCAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCaa  >  1:1411513/1‑64 (MQ=255) |                                                                 TGACAGTTGAGAAAATGCCGCTGCCTGAAGCTTCGCAACGTTAAGCTGATAAACATTCGACGCAT  >  W3110S.gb/2478960‑2479024

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑