Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2508411	2508526	116	28 [0]	[0] 33	ypdD	fused predicted PTS enzymes Hpr component, enzyme I component, and enzyme IIA component

CCGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATCG  >  W3110S.gb/2508527‑2508591 |                                                                 ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:1065694/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:981329/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:979092/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:937172/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:821201/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:788041/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:781470/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:749555/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:579259/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:342483/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:329215/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:310549/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:2432433/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:2250043/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:2246709/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:223620/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:2132764/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:1062952/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:1328336/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:1359417/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:1399946/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:1435019/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:1552485/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:1691654/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:1914140/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:1939167/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:1983491/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATcg  >  1:2122998/1‑65 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATc   >  1:676629/1‑64 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATc   >  1:1775085/1‑64 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATc   >  1:1277560/1‑64 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATc   >  1:2173044/1‑64 (MQ=255) ccGCGCGATAGCCGAGGAACGGGTTATCTTCCTGGGGAATATTCAGAt                   >  1:168261/1‑48 (MQ=255) |                                                                 CCGCGCGATAGCCGAGGAACGGGTTCTCTTCCTGGGGAATATTCAGATAAGGAATGCTTTTATCG  >  W3110S.gb/2508527‑2508591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑