Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2708233	2708244	12	17 [0]	[3] 31	rpoE	RNA polymerase, sigma 24 (sigma E) factor

CGTAAATCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGACAACATTAAG  >  W3110S.gb/2708241‑2708309     |                                                                 cGTAAATCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGttcttc               <  1:755666/56‑1 (MQ=255) cGTAAATCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGttcttc               <  1:1203490/56‑1 (MQ=255) cGTAAATCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGttcttc               <  1:2506587/56‑1 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:1150183/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:713535/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:688579/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:642993/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:601966/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:515552/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:401009/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:386289/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:2422122/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:2187751/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:2058561/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:1859865/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:1744530/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:2110274/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:1425271/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:1649532/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGac           >  1:1580895/1‑56 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGa            >  1:998099/1‑55 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGACAACATTaa   >  1:1633994/1‑64 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGACAACATTaa   >  1:1415532/1‑64 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGACAACATTaa   >  1:1410010/1‑64 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGACAACATTaa   >  1:1124789/1‑64 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGACAACATTaa   >  1:785388/1‑64 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGACAACATTaa   >  1:2522825/1‑64 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGACAACATTAAg  >  1:1620079/1‑65 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGACAACATTAAg  >  1:585442/1‑65 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGACAACATTAAg  >  1:349547/1‑65 (MQ=255)     aaTCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGACAACATTAAg  >  1:696737/1‑65 (MQ=255)     |                                                                 CGTAAATCTTCCGGGAGGGACTCAATAGTTCGGAAAACTATCTGTCTCAGTTCTTCTGACAACATTAAG  >  W3110S.gb/2708241‑2708309

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑