Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3038287	3038291	5	10 [0]	[0] 18	xerD	site‑specific tyrosine recombinase

CATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCA  >  W3110S.gb/3038292‑3038354 |                                                               catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGcc   >  1:2255929/1‑62 (MQ=255) catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCca  >  1:860675/1‑63 (MQ=255) catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCca  >  1:134177/1‑63 (MQ=255) catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCca  >  1:842757/1‑63 (MQ=255) catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCca  >  1:713335/1‑63 (MQ=255) catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCca  >  1:629358/1‑63 (MQ=255) catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCca  >  1:526641/1‑63 (MQ=255) catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCca  >  1:503713/1‑63 (MQ=255) catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCca  >  1:321924/1‑63 (MQ=255) catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCca  >  1:2460188/1‑63 (MQ=255) catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCca  >  1:2213374/1‑63 (MQ=255) catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCca  >  1:221164/1‑63 (MQ=255) catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCca  >  1:2049495/1‑63 (MQ=255) catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCca  >  1:1990490/1‑63 (MQ=255) catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCca  >  1:1637325/1‑63 (MQ=255) catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCca  >  1:1546196/1‑63 (MQ=255) catcatTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCAAGATTTTTTTCCAGCca  >  1:1772535/1‑63 (MQ=255) catcatAGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCca  >  1:1504112/1‑63 (MQ=255) |                                                               CATCATTGACAGATCGCGACGGTAAGCGTTCAACGTATTTTCAGCCAGATTTTTTTCCAGCCA  >  W3110S.gb/3038292‑3038354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑