Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3089131	3089173	43	10 [0]	[0] 13	endA	DNA‑specific endonuclease I

AAAGGCGTTGTTGATCTGCAATCGTGCGGCTATCAGGTGCGCAAAAATGAAAACCGCGCCAGCCG  >  W3110S.gb/3089174‑3089238 |                                                                 aaaTGCGTTGTTGATCTGCAATCGTGCGGCTATCAGGTgc                           >  1:903466/1‑40 (MQ=255) aaaGGCGTTGTTGATCTGCAATCGTGCGGCTATCAGGTGCGCAAAAATGAAAACCGCGCCAGCcg  >  1:1210048/1‑65 (MQ=255) aaaGGCGTTGTTGATCTGCAATCGTGCGGCTATCAGGTGCGCAAAAATGAAAACCGCGCCAGCcg  >  1:1291952/1‑65 (MQ=255) aaaGGCGTTGTTGATCTGCAATCGTGCGGCTATCAGGTGCGCAAAAATGAAAACCGCGCCAGCcg  >  1:130220/1‑65 (MQ=255) aaaGGCGTTGTTGATCTGCAATCGTGCGGCTATCAGGTGCGCAAAAATGAAAACCGCGCCAGCcg  >  1:1471543/1‑65 (MQ=255) aaaGGCGTTGTTGATCTGCAATCGTGCGGCTATCAGGTGCGCAAAAATGAAAACCGCGCCAGCcg  >  1:1474352/1‑65 (MQ=255) aaaGGCGTTGTTGATCTGCAATCGTGCGGCTATCAGGTGCGCAAAAATGAAAACCGCGCCAGCcg  >  1:1987113/1‑65 (MQ=255) aaaGGCGTTGTTGATCTGCAATCGTGCGGCTATCAGGTGCGCAAAAATGAAAACCGCGCCAGCcg  >  1:2275353/1‑65 (MQ=255) aaaGGCGTTGTTGATCTGCAATCGTGCGGCTATCAGGTGCGCAAAAATGAAAACCGCGCCAGCcg  >  1:274084/1‑65 (MQ=255) aaaGGCGTTGTTGATCTGCAATCGTGCGGCTATCAGGTGCGCAAAAATGAAAACCGCGCCAGCcg  >  1:76318/1‑65 (MQ=255) aaaGGCGTTGTTGATCTGCAATCGTGCGGCTATCAGGTGCGCAAAAATGAAAACCGCGCCAGCcg  >  1:778476/1‑65 (MQ=255) aaaGGCGTTGTTGATCTGCAATCGTGCGGCTATCAGGTGCGCAAAAATGAAAACCGCGCCAGCcg  >  1:872136/1‑65 (MQ=255) aaaGGCGTTGTTGATCTGCAATAGTGCGGCTATCAGGTGCGCAAAAATGAAAACcgcg         >  1:659042/1‑58 (MQ=255) |                                                                 AAAGGCGTTGTTGATCTGCAATCGTGCGGCTATCAGGTGCGCAAAAATGAAAACCGCGCCAGCCG  >  W3110S.gb/3089174‑3089238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑