Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3116098	3116195	98	22 [0]	[0] 28	yghJ	predicted inner membrane lipoprotein

CCAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGC  >  W3110S.gb/3116196‑3116260 |                                                                 ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGa                               >  1:18308/1‑36 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAg                             >  1:1818921/1‑38 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTGTCATTAcgc  >  1:2194282/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:97820/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:1041671/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:82280/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:786825/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:656392/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:530278/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:408408/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:327924/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:251806/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:2503610/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:2322877/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:1860262/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:1825785/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:1752170/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:1512144/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:1466245/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:145151/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:1365317/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:1341602/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:1210010/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:1178526/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:1140512/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:111709/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgc  >  1:11170/1‑65 (MQ=255) ccAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcg   >  1:194047/1‑64 (MQ=255) |                                                                 CCAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGC  >  W3110S.gb/3116196‑3116260

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑