Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3169114	3169116	3	11 [0]	[2] 40	qseB	DNA‑binding response regulator in two‑component regulatory system with QseC

GTATTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAC  >  W3110S.gb/3169115‑3169180   |                                                                gTATTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGa   >  1:918619/1‑65 (MQ=255) gTATTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGa   >  1:1920753/1‑65 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAg        >  1:1932535/1‑58 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGag  >  1:205119/1‑63 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGa   >  1:1489459/1‑63 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:2405352/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:2325396/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:2407051/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:2434905/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:2439470/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:2445882/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:2459107/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:2460528/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:2502381/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:254739/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:351944/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:371000/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:395254/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:594602/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:802243/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:805730/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:812962/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:1569614/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:1124353/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:1147068/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:1162426/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:1167537/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:1210727/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:128415/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:1311043/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:1550707/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:2331564/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:1636641/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:1780603/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:1941620/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:1987289/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:2008172/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:2243724/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAc  >  1:1082405/1‑64 (MQ=255)   aTTGGTTACACATTAGGTGAGAAATGAAATTAACCCAACGTCTTAGTCTGCGCGTCAgg       >  1:2460226/1‑59 (MQ=255)   |                                                                GTATTGGTTACACATTAGGTGAGAAATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGAC  >  W3110S.gb/3169115‑3169180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑