Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3460882	3460917	36	16 [0]	[2] 75	thrT	tRNA‑Thr

CAAGGGTGCGCTCTACCAACTGAGCTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTG  >  W3110S.gb/3460894‑3460981                         |                                                                cAAGGGTGCGCTCTACCAACTGAGCTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGaa                           <  1:1042932/63‑1 (MQ=255) cAAGGGTGCGCTCTACCAACTGAGCTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGaa                           <  1:1255796/63‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGTGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1079990/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2073802/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2459228/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2396408/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2377879/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2346739/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:222595/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2184446/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2162406/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2137508/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2102208/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2541659/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2070846/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2064220/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2047519/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2033765/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2015941/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1982239/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1947256/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:488649/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:962716/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:859161/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:780876/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:771839/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:651533/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:642826/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:620509/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:543713/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2487761/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:450391/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:42974/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:331507/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:328490/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:295104/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:284973/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1872267/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:2493543/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1220852/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1464448/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1455957/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1407117/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1391019/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1353827/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1351500/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1241240/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1239458/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:152179/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1142661/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:111893/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1117789/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1111728/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1065269/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1038514/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1033457/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1029053/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1749783/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1911797/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1870697/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1864893/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1835692/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1818751/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1786824/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1750479/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1942651/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1741587/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1711597/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1686855/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:164552/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1622318/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1610605/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1606635/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1593377/64‑1 (MQ=255)                         cTATATCAGCACATCTTGGAGCGGGCAGCGGGAATAGAACCCGCATCATCAGCTTGGAAGGCTg  <  1:1001399/64‑1 (MQ=255)                         |                                                                CAAGGGTGCGCTCTACCAACTGAGCTATATCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTG  >  W3110S.gb/3460894‑3460981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑