Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	249118	249203	86	4 [0]	[0] 7	fhiA	ECK0230:JW5811:b0229; flagellar system protein, promoterless fragment

CTGACTGGGCTTAAGGCGGAAGTTTTCCCGAATGCGGATCTCCGGCAGCAGCACGCCGTTGCCGT  >  W3110S.gb/249204‑249268 |                                                                 ctgactgGGCTTAAGGCGGAAGTTTTCCCGAATGTGGATCTCCGGCAGCAGCACGCCGTTGCCGt  <  1:334368/65‑1 (MQ=255) ctgactgGGCTTAAGGCGGAAGTTTTCCCGAATGCGGATCTCCGGCAGCAGCACGCCGTTGCCGt  <  1:1861366/65‑1 (MQ=255) ctgactgGGCTTAAGGCGGAAGTTTTCCCGAATGCGGATCTCCGGCAGCAGCACGCCGTTGCCGt  <  1:1869073/65‑1 (MQ=255) ctgactgGGCTTAAGGCGGAAGTTTTCCCGAATGCGGATCTCCGGCAGCAGCACGCCGTTGCCGt  <  1:1935832/65‑1 (MQ=255) ctgactgGGCTTAAGGCGGAAGTTTTCCCGAATGCGGATCTCCGGCAGCAGCACGCCGTTGCCGt  <  1:1956764/65‑1 (MQ=255) ctgactgGGCTTAAGGCGGAAGTTTTCCCGAATGCGGATCTCCGGCAGCAGCACGCCGTTGCCGt  <  1:2391279/65‑1 (MQ=255) ctgactgGGCTTAAGGCGGAAGTTTTCCCGAATGCGGATCTCCGGCAGCAGCACGCCGTTGCCGt  <  1:2432011/65‑1 (MQ=255) |                                                                 CTGACTGGGCTTAAGGCGGAAGTTTTCCCGAATGCGGATCTCCGGCAGCAGCACGCCGTTGCCGT  >  W3110S.gb/249204‑249268

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑