Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3539707	3539790	84	43 [0]	[0] 33	rhaB	rhamnulokinase

ATCAATAGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTGG  >  W3110S.gb/3539791‑3539855 |                                                                 atctataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:321205/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTgg                            >  1:1977113/1‑39 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCg                        >  1:956887/1‑43 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:2386150/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:2310028/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:2497376/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:296164/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:430377/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:608380/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:624973/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:640171/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:685735/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:724806/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:752439/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:802263/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:807885/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:834139/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:1004669/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:2301110/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:2236860/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:215460/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:1998247/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:194907/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:1840513/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:175932/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:1620948/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:161403/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:1588938/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:1444700/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:1387090/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:1076615/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTgg  >  1:1027167/1‑65 (MQ=255) atcaataGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTg   >  1:635726/1‑64 (MQ=255) |                                                                 ATCAATAGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTGG  >  W3110S.gb/3539791‑3539855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑