Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3660063	3660074	12	10 [0]	[0] 32	wzxE	O‑antigen translocase

AACAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAA  >  W3110S.gb/3660075‑3660137 |                                                               aaCAGTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:2407894/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:2395985/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:951208/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:859711/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:837841/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:808688/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:732659/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:605516/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:394318/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:353018/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:340427/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:319359/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:317117/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:2431956/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:2398809/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1072942/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:2375822/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:2245050/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:2178167/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:2134699/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:2124070/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:211370/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:19126/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:188436/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1876278/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1712608/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1705190/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1681752/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1653135/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:152043/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1184293/1‑63 (MQ=255) aaCAATCCCTGGCTGATTGGCGCAGCTCCCAGCACAAAAACCAGCGCCATCAGCGTa        >  1:2436396/1‑57 (MQ=255) |                                                               AACAATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAA  >  W3110S.gb/3660075‑3660137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑