Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3786317	3786333	17	13 [0]	[0] 22	emrD	multidrug efflux system protein

CAGCAGATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCATAT  >  W3110S.gb/3786334‑3786398 |                                                                 cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:210297/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:891970/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:718906/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:637384/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:634409/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:487804/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:366289/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:2473273/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:2372741/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:2367150/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:2111985/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:1059792/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:2095471/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:1993119/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:1927675/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:1599495/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:1581867/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:1552279/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:1473751/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:1359011/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:1281707/65‑1 (MQ=255) cagcagATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCatat  <  1:1182319/65‑1 (MQ=255) |                                                                 CAGCAGATAAGCGCCCATTACGCTCTGCACCGCCCCTTCACGGACGTTGAGATCGCGCGCCATAT  >  W3110S.gb/3786334‑3786398

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑