Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3816559	3816572	14	12 [0]	[0] 35	spoT	bifunctional (p)ppGpp synthetase II and guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase

GAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAC  >  W3110S.gb/3816573‑3816637 |                                                                 gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACTAc  <  1:2105/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:556176/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:2158508/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:240774/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:2490350/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:2529512/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:431819/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:467543/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:478944/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:972327/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:605682/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:606033/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:616702/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:696301/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:882101/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:910253/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:1068136/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:188268/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:1163058/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:1291161/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:1311055/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:1429455/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:1444869/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:1555735/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:1574976/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:1581231/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:1647418/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:1648215/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:1658380/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:17751/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:1784160/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:1876377/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:2015066/65‑1 (MQ=255) gAATCATCACGCTTGAGGTTTCTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:2456478/65‑1 (MQ=255) gAATCATCACGCTTGAGGGTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAc  <  1:51864/65‑1 (MQ=255) |                                                                 GAATCATCACGCTTGAGGTTTTTCAGCAACTGACGAATTTTGGCGCGCGCTTTCGAGCTAACGAC  >  W3110S.gb/3816573‑3816637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑