Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3844880	3844889	10	18 [0]	[0] 25	rfaF	ADP‑heptose:LPS heptosyltransferase II

TAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGTT  >  W3110S.gb/3844890‑3844953 |                                                                tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCg        >  1:402525/1‑58 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:2368929/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:948346/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:883895/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:758640/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:75294/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:735769/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:2522244/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:2510140/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:2423467/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:238268/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:1066597/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:2348013/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:2303753/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:2042872/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:1667070/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:1547404/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:1530385/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:1525221/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:1225744/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:1158406/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGtt  >  1:1103744/1‑64 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGt   >  1:1581910/1‑63 (MQ=255) tAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGt   >  1:2533082/1‑63 (MQ=255) tAGTGTGGCAAGCGTTTTGCCGGACCAAACTCCGCAACCGGGCAAAAACCAATCATCGGACGt   >  1:668337/1‑63 (MQ=255) |                                                                TAGTGTGGCCAGCGTTTTGCCGGACCAAACTCCGCACCCGGGCAAAAACCAATCATCGGACGTT  >  W3110S.gb/3844890‑3844953

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑