Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3847514	3847538	25	20 [3]	[3] 17	htrL	hypothetical protein

GTAACACTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGAA  >  W3110S.gb/3847536‑3847586    |                                                gTAACACTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCa      <  1:840549/47‑1 (MQ=255) gTAACACTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCa      <  1:50450/47‑1 (MQ=255) gTAACACTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCa      <  1:2525452/47‑1 (MQ=255)    acacTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGaa  <  1:1983477/48‑1 (MQ=255)    acacTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGaa  <  1:576628/48‑1 (MQ=255)    acacTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGaa  <  1:493569/48‑1 (MQ=255)    acacTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGaa  <  1:2273989/48‑1 (MQ=255)    acacTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGaa  <  1:2216606/48‑1 (MQ=255)    acacTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGaa  <  1:2068628/48‑1 (MQ=255)    acacTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGaa  <  1:1063673/48‑1 (MQ=255)    acacTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGaa  <  1:187946/48‑1 (MQ=255)    acacTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGaa  <  1:1817046/48‑1 (MQ=255)    acacTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGaa  <  1:1707967/48‑1 (MQ=255)    acacTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGaa  <  1:1646722/48‑1 (MQ=255)    acacTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGaa  <  1:1436900/48‑1 (MQ=255)    acacTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGaa  <  1:1433954/48‑1 (MQ=255)    acacTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGaa  <  1:1317733/48‑1 (MQ=255)    |                                                GTAACACTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGAA  >  W3110S.gb/3847536‑3847586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑