Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3861016	3861017	2	16 [0]	[0] 32	lldR	DNA‑binding transcriptional repressor

CATGCCATGCGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCGG  >  W3110S.gb/3861018‑3861081 |                                                                catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGc                             >  1:1503688/1‑37 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:230811/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:94584/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:945103/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:925216/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:910576/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:865243/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:811199/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:704259/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:52689/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:517457/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:507735/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:472524/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:319076/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:287407/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:2320600/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:1113377/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:2130650/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:2104163/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:2085381/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:2074565/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:1779926/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:1767892/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:1713308/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:1712492/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:1385571/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:1255513/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:1195026/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCgg  >  1:1128867/1‑64 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCg   >  1:2252746/1‑63 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCg   >  1:2453167/1‑63 (MQ=255) catgccatgcGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCg   >  1:2195982/1‑63 (MQ=255) |                                                                CATGCCATGCGGTGCTGGCTTCAATGGCGTAGCGGGCTTCCAGAATATCGAAACTGTAATCCGG  >  W3110S.gb/3861018‑3861081

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑