Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	295389	295498	110	18 [0]	[0] 21	intF	predicted phage integrase

TTGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTTGT  >  W3110S.gb/295499‑295562 |                                                                ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:2312718/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:997567/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:974010/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:836992/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:804532/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:765249/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:741808/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:721617/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:678820/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:585042/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:2509444/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:1183090/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:229614/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:1899111/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:157205/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:1505879/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:1334272/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:1299699/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:1288827/1‑64 (MQ=255) ttGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:1218942/1‑64 (MQ=255) ttGCAGGAAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTtgt  >  1:1540787/1‑64 (MQ=255) |                                                                TTGCAGGCAATCATCAGCTTTACTCGCTGACACGGGAACCATTTTTCTTACGTTGTAATCTTGT  >  W3110S.gb/295499‑295562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑