Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4406566	4406645	80	6 [1]	[0] 31	[hflX]	[hflX]

CTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATGG  >  W3110S.gb/4406646‑4406710 |                                                                 cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGaca                             >  1:280124/1‑38 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGTGATCACCGCATAACAAATATgg  >  1:1182428/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCa                   >  1:1658679/1‑48 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:445267/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:239594/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:2524967/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:289109/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:34409/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:394962/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:399098/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:2048942/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:450504/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:625828/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:751258/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:793729/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:871984/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:890732/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:2367416/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:114689/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:203089/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:1855772/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:1809833/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:1585399/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:1567206/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:1460856/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:1454008/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:1306754/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:1227043/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:1217380/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATgg  >  1:1172321/1‑65 (MQ=255) cTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATg   >  1:1629782/1‑64 (MQ=255) |                                                                 CTGAAGCGTGGAGTCATATCCTCTGGCGTCGAAAGACAACAGGGATCACCGCATAACAAATATGG  >  W3110S.gb/4406646‑4406710

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑