Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4485045	4485060	16	9 [0]	[2] 37	yjgN	conserved inner membrane protein

TCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTG  >  W3110S.gb/4485056‑4485125      |                                                                 tCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCtt       >  1:123771/1‑65 (MQ=255) tCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCtt       >  1:815472/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTGCGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:377398/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCttt      >  1:1183659/1‑61 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:2148352/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:897876/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:215923/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:2367077/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:2373880/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:2519078/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:2523202/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:612964/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:713879/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:782446/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:811994/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:842843/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:845656/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:855507/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:883268/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:1081127/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:1515581/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:119409/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:1209352/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:1266868/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:1335073/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:1349423/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:1360479/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:1494010/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:1495798/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:19724/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:1557320/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:1571048/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:1611453/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:1713664/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:1727799/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:1733751/1‑65 (MQ=255)      tCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTg  >  1:1935405/1‑65 (MQ=255)      |                                                                 TCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTG  >  W3110S.gb/4485056‑4485125

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑