Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4504685	4504707	23	25 [0]	[0] 24	yjgX	ECK4266:JW5764+JW4234+JW5763:b4575; KpLE2 phage‑like element; hypothetical protein

TCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGC  >  W3110S.gb/4504708‑4504773 |                                                                  tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:1046281/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:936228/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:872688/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:810038/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:795873/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:667678/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:621714/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:600562/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:353411/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:269178/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:2444071/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:2355182/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:2172719/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:2135028/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:1819650/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:1783925/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:1649979/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:1615485/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:1215641/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:1184946/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:1152498/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg     >  1:1044185/1‑63 (MQ=255) tCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTAACACGGATTTGGATGAGAACCCATCAtg     >  1:252690/1‑63 (MQ=255) tCCAGGTAATTA‑TCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGc  >  1:2376759/1‑65 (MQ=255) |                                                                  TCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGC  >  W3110S.gb/4504708‑4504773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑