Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1047564	1047647	84	4 [0]	[0] 8	ymcA	conserved hypothetical protein

TGCCTGAGGCAGTTTGCCAGCGAAATCATTCTGGTAATTGTTTCCATCGTATTCG  >  W3110S.gb/1047648‑1047702 |                                                       tGCCTGAGGCAGTTTGCCAGCGAAATCATTCTGGTAATTGTTTCCATCGTATTCg  >  1:1154302/1‑55 (MQ=255) tGCCTGAGGCAGTTTGCCAGCGAAATCATTCTGGTAATTGTTTCCATCGTATTCg  >  1:1333319/1‑55 (MQ=255) tGCCTGAGGCAGTTTGCCAGCGAAATCATTCTGGTAATTGTTTCCATCGTATTCg  >  1:1645394/1‑55 (MQ=255) tGCCTGAGGCAGTTTGCCAGCGAAATCATTCTGGTAATTGTTTCCATCGTATTCg  >  1:1750684/1‑55 (MQ=255) tGCCTGAGGCAGTTTGCCAGCGAAATCATTCTGGTAATTGTTTCCATCGTATTCg  >  1:1877847/1‑55 (MQ=255) tGCCTGAGGCAGTTTGCCAGCGAAATCATTCTGGTAATTGTTTCCATCGTATTCg  >  1:2340633/1‑55 (MQ=255) tGCCTGAGGCAGTTTGCCAGCGAAATCATTCTGGTAATTGTTTCCATCGTATTCg  >  1:384775/1‑55 (MQ=255) tGCCTGAGGCAGTTTGCCAGCGAAATCATTCTGGTAATTGTTTCCATCGTATTCg  >  1:696413/1‑55 (MQ=255) |                                                       TGCCTGAGGCAGTTTGCCAGCGAAATCATTCTGGTAATTGTTTCCATCGTATTCG  >  W3110S.gb/1047648‑1047702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑