Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1061133	1061144	12	11 [0]	[0] 34	torA	trimethylamine N‑oxide (TMAO) reductase I, catalytic subunit

CGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAG  >  W3110S.gb/1061145‑1061208 |                                                                cGCCATCAGCAGTTCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:493900/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCa                          >  1:118613/1‑40 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:44721/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:1980056/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:2138921/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:224175/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:2244668/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:2306615/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:232384/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:2401462/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:275645/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:1918738/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:497625/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:614400/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:647332/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:699814/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:737490/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:816674/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:1046073/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:1884515/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:1869953/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:1765628/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:1759584/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:1717964/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:1703492/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:1636553/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:1551532/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:1466740/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:138332/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:1356938/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:1293359/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:1262453/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAg  >  1:1107768/1‑64 (MQ=255) cGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTAATCGCCATAg  >  1:1287616/1‑64 (MQ=255) |                                                                CGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAG  >  W3110S.gb/1061145‑1061208

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑