Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1088951	1088955	5	19 [0]	[0] 30	ycdR	predicted enzyme associated with biofilm formation

CTCTGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCT  >  W3110S.gb/1088956‑1089020 |                                                                 ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTcccc   >  1:594014/1‑64 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:1771551/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:90902/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:894384/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:86709/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:815154/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:591340/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:506923/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:496745/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:457417/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:447765/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:271765/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:2412039/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:2228314/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:1951852/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:1085002/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:1694666/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:1636040/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:1634353/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:1633049/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:1626256/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:1606041/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:1564260/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:1524442/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:1498569/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:1456002/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:1390784/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:1336914/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:1330884/1‑65 (MQ=255) ctctGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCt  >  1:122184/1‑65 (MQ=255) |                                                                 CTCTGTCATCGAAAGGAGAGAGACGGTGATATTGTTCAGGATGAATTTGTGCTTTTTTCTCCCCT  >  W3110S.gb/1088956‑1089020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑