Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1133671	1133707	37	6 [0]	[0] 18	flgD	flagellar hook assembly protein

GTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGC  >  W3110S.gb/1133708‑1133766 |                                                           gTAACCTGATCGGTCACGGCGTGATGATCCCCGGcac                        >  1:394042/1‑37 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGc  >  1:2134666/1‑59 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGc  >  1:549191/1‑59 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGc  >  1:408637/1‑59 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGc  >  1:243099/1‑59 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGc  >  1:233838/1‑59 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGc  >  1:2332219/1‑59 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGc  >  1:2318314/1‑59 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGc  >  1:2303129/1‑59 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGc  >  1:1733389/1‑59 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGc  >  1:1705926/1‑59 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGc  >  1:1652308/1‑59 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGc  >  1:1487786/1‑59 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGc  >  1:1400749/1‑59 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGc  >  1:1341487/1‑59 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGc  >  1:1277592/1‑59 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGc  >  1:1170006/1‑59 (MQ=255) gTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACCGTTCTTGCGGGAACCGGc  >  1:1165000/1‑59 (MQ=255) |                                                           GTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGC  >  W3110S.gb/1133708‑1133766

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑