Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1135161	1135227	67	48 [0]	[0] 12	flgE	flagellar hook protein

CTGGAAGCGTCCAACGTCGATCTCAGTAAAGAACTGGTCAATATGATCGTTGCCCAGCGTAACT  >  W3110S.gb/1135228‑1135291 |                                                                cTGGAAGCGTCCACCGTCGATCTCAGTAAAGAACTGGTCAATATGATCGTTGCCCAGCGTAACt  <  1:2328075/64‑1 (MQ=255) cTGGAAGCGTCCAACGTCGATCTCAGTAAAGAACTGGTCAATATGATCGTTGCCCAGCGTAACt  <  1:1059554/64‑1 (MQ=255) cTGGAAGCGTCCAACGTCGATCTCAGTAAAGAACTGGTCAATATGATCGTTGCCCAGCGTAACt  <  1:1078963/64‑1 (MQ=255) cTGGAAGCGTCCAACGTCGATCTCAGTAAAGAACTGGTCAATATGATCGTTGCCCAGCGTAACt  <  1:1095655/64‑1 (MQ=255) cTGGAAGCGTCCAACGTCGATCTCAGTAAAGAACTGGTCAATATGATCGTTGCCCAGCGTAACt  <  1:1112807/64‑1 (MQ=255) cTGGAAGCGTCCAACGTCGATCTCAGTAAAGAACTGGTCAATATGATCGTTGCCCAGCGTAACt  <  1:112156/64‑1 (MQ=255) cTGGAAGCGTCCAACGTCGATCTCAGTAAAGAACTGGTCAATATGATCGTTGCCCAGCGTAACt  <  1:1767416/64‑1 (MQ=255) cTGGAAGCGTCCAACGTCGATCTCAGTAAAGAACTGGTCAATATGATCGTTGCCCAGCGTAACt  <  1:1979812/64‑1 (MQ=255) cTGGAAGCGTCCAACGTCGATCTCAGTAAAGAACTGGTCAATATGATCGTTGCCCAGCGTAACt  <  1:2142250/64‑1 (MQ=255) cTGGAAGCGTCCAACGTCGATCTCAGTAAAGAACTGGTCAATATGATCGTTGCCCAGCGTAACt  <  1:343345/64‑1 (MQ=255) cTGGAAGCGTCCAACGTCGATCTCAGTAAAGAACTGGTCAATATGATCGTTGCCCAGCGTAACt  <  1:384814/64‑1 (MQ=255) cTGGAAGCGTCCAACGTCGATCTCAGTAAAGAACTGGTCAATATGATCGTTGCCCAGCGTAACt  <  1:969365/64‑1 (MQ=255) |                                                                CTGGAAGCGTCCAACGTCGATCTCAGTAAAGAACTGGTCAATATGATCGTTGCCCAGCGTAACT  >  W3110S.gb/1135228‑1135291

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑